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I have some programs loaded form add/remove, but I don't see them anywhere in my app list. For example GCC. will it show up elsewhere?
The list contains GUI apps, CLI apps and libraries. GCC is a CLI (command line interface) application, so that and the libraries will not show up in the gui application list.
NM not GUI.
GCC is CLI application, not gui.
CLI applications might appear as well but is not commond to creat .desktop files (those are what you see in the menus) for them.
By default, CLI won't appear on your menus